mgibio/bam_readcount_helper-cwl repository overview

#create a branch for the new version based on the most recent version
git clone griffithlab/bam_readcount_helper-cwl:1.2.1
cd bam_readcount_helper-cwl
git checkout 1.2.0
git checkout -b 1.2.1

#make updates to the dockerfile
#...

#build the updated docker image
docker build -t griffithlab/bam_readcount_helper-cwl:1.2.1 .

#login to the docker image to test locally
docker run --rm -it --entrypoint /bin/bash griffithlab/bam_readcount_helper-cwl:1.2.1

#push the image to a dockerhub repo for testing
docker login
docker push griffithlab/bam_readcount_helper-cwl:1.2.1