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replikation/unicycler:latest

Manifest digest

sha256:325aa28b754e6241f2515bc7faf5b5399230c8872c3ed514b7a328833e7d84ae

OS/ARCH

linux/amd64

Compressed size

701.24 MB

Last pushed

over 7 years by replikation

Type

Image

Manifest digest

sha256:325aa28b754e6241f2515bc7faf5b5399230c8872c3ed514b7a328833e7d84ae

Image Layers

Image Layers

1ADD file ... in / 35.48 MB
2/bin/sh -c set -xe &&851 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*547 B
4/bin/sh -c mkdir -p /run/systemd162 B
5CMD ["/bin/bash"]0 B
6ENV DEBIAN_FRONTEND=noninteractive0 B
7MAINTAINER Christian Brandt <[email protected]>0 B
8/bin/sh -c apt-get update &&268.83 MB
9/bin/sh -c apt-get clean331 B
10/bin/sh -c mkdir unicycler98 B
11WORKDIR /unicycler0 B
12/bin/sh -c wget --no-check-certificate "http://cab.spbu.ru/files/release3.13.0/SPAdes-3.13.0.tar.gz"16.34 MB
13WORKDIR /unicycler/SPAdes-3.13.0/src/build0 B
14/bin/sh -c cmake ..248.75 KB
15/bin/sh -c make install36.26 MB
16WORKDIR /unicycler0 B
17/bin/sh -c rm -r SPAdes-3.13.0*160 B
18/bin/sh -c git clone --recursive78.68 MB
19WORKDIR /unicycler/racon/build0 B
20/bin/sh -c cmake -DCMAKE_BUILD_TYPE=Release ..71.43 KB
21/bin/sh -c make && make692.34 KB
22WORKDIR /unicycler/0 B
23/bin/sh -c rm -r racon*132 B
24/bin/sh -c wget --no-check-certificate https://github.com/samtools/samtools/releases/download/1.9/samtools-1.9.tar.bz25.16 MB
25WORKDIR /unicycler/samtools/0 B
26/bin/sh -c ./configure --without-curses29.53 KB
27/bin/sh -c make && make15.14 MB
28WORKDIR /unicycler0 B
29/bin/sh -c rm -r samtools*136 B
30/bin/sh -c wget --no-check-certificate https://github.com/BenLangmead/bowtie2/releases/download/v2.3.4.3/bowtie2-2.3.4.3-linux-x86_64.zip129.04 MB
31WORKDIR /unicycler/bowtie2/0 B
32/bin/sh -c mv bowtie2* /usr/local/bin48.31 MB
33WORKDIR /unicycler0 B
34/bin/sh -c rm -r bowtie2*171 B
35WORKDIR /0 B
36/bin/sh -c cd /usr/local/bin/ &&6.53 MB
37/bin/sh -c git clone https://github.com/lh3/minimap22.86 MB
38ENV PATH=/minimap2/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
39WORKDIR /unicycler0 B
40/bin/sh -c git clone https://github.com/rrwick/Unicycler.git54.52 MB
41WORKDIR /unicycler/Unicycler0 B
42ENV TERM=xterm0 B
43/bin/sh -c python3 setup.py install2.73 MB
44WORKDIR /unicycler0 B
45/bin/sh -c rm -r Unicycler131 B
46WORKDIR /0 B
47ENTRYPOINT ["unicycler"]0 B
48CMD ["--help"]0 B
49/bin/sh -c apt-get purge -y349.5 KB

Command

ADD file:7ce84f13f11609a50ece7823578159412e2299c812746d1d1f1ed5db0728bd37 in /